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petab.calculate: compare all common columns #2550

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Run time

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Job	Run time
build (windows-latest, 3.10)	6m 11s
build (windows-latest, 3.12)	7m 0s
build (macos-latest, 3.10)	2m 46s
build (macos-latest, 3.12)	4m 17s
build (ubuntu-latest, 3.10)	5m 10s
build (ubuntu-latest, 3.12)	7m 16s
	32m 40s