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Merge branch 'master' of github.com:eScienceLab/eScienceLab.github.io
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publications/index.md

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## 2025
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Sean Wilkinson, Meznah Aloqalaa, Khalid Belhajjame, Michael R. Crusoe, Bruno de Paula Kinoshita, Luiz Gadelha, Daniel Garijo, Ove Johan Ragnar Gustafsson, Nick Juty, Sehrish Kanwal, Farah Zaib Khan, Johannes Köster, Karsten Peters-von Gehlen, Line Pouchard, Randy K. Rannow, Stian Soiland-Reyes, Nicola Soranzo, Shoaib Sufi, Ziheng Sun, Baiba Vilne, Merridee A. Wouters, Denis Yuen, Carole Goble (2024):
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Sean Wilkinson, Meznah Aloqalaa, Khalid Belhajjame, Michael R. Crusoe, Bruno de Paula Kinoshita, Luiz Gadelha, Daniel Garijo, Ove Johan Ragnar Gustafsson, Nick Juty, Sehrish Kanwal, Farah Zaib Khan, Johannes Köster, Karsten Peters-von Gehlen, Line Pouchard, Randy K. Rannow, Stian Soiland-Reyes, Nicola Soranzo, Shoaib Sufi, Ziheng Sun, Baiba Vilne, Merridee A. Wouters, Denis Yuen, Carole Goble (2025):
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[**Applying the FAIR Principles to Computational Workflows**](https://doi.org/10.1038/s41597-025-04451-9).
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_Scientific Data_ **12**:328
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https://doi.org/10.1038/s41597-025-04451-9
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_Scientific Data_ **12**:328
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<https://doi.org/10.1038/s41597-025-04451-9>
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Yo Yehudi, Lukas Hughes-Noehrer, Carole Goble, Caroline Jay (2025):
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[**COVID-19: An exploration of consecutive systemic barriers to pathogen-related data sharing during a pandemic**](https://doi.org/10.1017/dap.2024.79).
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_Data & Policy_ **7**:e4
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<https://doi.org/10.1017/dap.2024.79>
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## 2024
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Yojana Gadiya, Tooba Abbassi-Daloii, Vassilios Ioannidis, Nick Juty, Claus Stie Kallesøe, Marie Attwood, Manfred Kohler, Philip Gribbon, Gesa Witt (2024):
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**From spreadsheet lab data templates to knowledge graphs**: A FAIR data journey in the domain of AMR research.
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_bioRxiv_
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<https://doi.org/10.1101/2024.07.18.604030>
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Chris Orton, Lara Edwards, David Seymour, Monica Jones, Philip Quinlan, Simon Thompson, Carole Goble, Jennifer Quint, Aziz Sheikh (2024):
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[**Data as infrastructure**: Systematic data curation addressing fundamental data content differences across the UK](https://doi.org/10.23889/ijpds.v9i5.2683).
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_Conference Proceedings for International Population Data Linkage Conference 2024_, Chicago, USA, 2024-09-15/--18.
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_Drug Discovery Today_ **27**(8)
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<https://doi.org/10.1016/j.drudis.2022.05.010>
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Yo Yehudi, Lukas Hughes-Noehrer, Carole Goble, Caroline Jay (2022):
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[**COVID-19: An exploration of consecutive systemic barriers to pathogen-related data sharing during a pandemic**](https://arxiv.org/pdf/2205.12098).
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_arXiv_ 2205.12098 [cs.CY] (preprint)
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<https://doi.org/10.48550/arXiv.2205.12098>
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Rachel Lyne, Adrián Bazaga, Daniela Butano, Sergio Contrino, Joshua Heimbach, Fengyuan Hu, Alexis Kalderimis, Mike Lyne, Kevin Reierskog, Radek Stepan, Julie Sullivan, Archie Wise, Yo Yehudi, Gos Micklem (2022):
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[**HumanMine: advanced data searching, analysis and cross-species comparison**](https://doi.org/10.1101/2022.05.11.491545).
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_bioRxiv_ 2022.05.11.491545

publications/presentations.md

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Recent presentations are uploaded to the [eScience Lab Zenodo Community](https://zenodo.org/communities/esciencelab/records)
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## 2024
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## 2025
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* Phil Reed (2025): [mTeSS-X: Scaling training portal federation for RIs through Multi-tenanting and Exchange](https://doi.org/10.5281/zenodo.14987387), Research Data in the Physical Sciences: A Forum for Librarians and Research Support Professionals, 2025-03-06
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* Phil Reed (2025): [ELIXIR and the Physical Sciences: shared tools and services](https://doi.org/10.5281/zenodo.14987487), Research Data in the Physical Sciences: A Forum for Librarians and Research Support Professionals, 2025-03-05
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* Nick Juty, Phil Reed (2025): [Formalising mappings from mayhem](https://doi.org/10.5281/zenodo.14866675), FAIRfest, 2025-02-13
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## 2024
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* Phil Reed (2024): [UK activity at CarpentryConnect Heidelberg 2024](https://doi.org/10.5281/zenodo.14552420), UK Carpentries monthly call, 2024-12-17
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* Stian Soiland-Reyes (2024): [RO-Crate and BioDT](https://doi.org/10.5281/zenodo.14036224), BioDT Cross-work package meeting, 2024-11-04
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* Stian Soiland-Reyes (2024): [RO-Crate in EOSC-ENTRUST architecture](https://doi.org/10.5281/zenodo.13909153), EOSC-ENTRUST Architecture work package, 2024-10-07
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* Stian Soiland-Reyes, Carole Goble (2024): [WorkflowHub cloud integration in ELIXIR](https://doi.org/10.5281/zenodo.11654943), ELIXIR All Hands Meeting 2024 ([AHM2024](https://elixir-events.eventscase.com/EN/ahm2024/Agenda)), Uppsala, Sweden, 2024-06-12
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* Tim Beck, Stian Soiland-Reyes (2024): [Potential of ELIXIR cloud methods in EOSC-ENTRUST and HDR UK](https://doi.org/10.5281/zenodo.11654733), ELIXIR All Hands Meeting 2024 ([AHM2024](https://elixir-events.eventscase.com/EN/ahm2024/Agenda)), Uppsala, Sweden, 2024-06-12
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* Phil Reed, Munazah Andrabi (2024): [FAIRDOM-SEEK user documentation and guidelines](https://doi.org/10.5281/zenodo.12166463), FAIRDOM User Meeting, 2024-06-05

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