From 0151cf55a18d9e7a3781b2c321c4aaec22455461 Mon Sep 17 00:00:00 2001
From: jhudsl-robot <null>
Date: Fri, 6 Jun 2025 21:06:31 +0000
Subject: [PATCH 1/3] =?UTF-8?q?=F0=9F=94=84=20Synced=20local=20'.github/wo?=
 =?UTF-8?q?rkflows/'=20with=20remote=20'.github/workflows/'?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

release-renderActionTry2
---
 .github/workflows/build-collection.yml |  97 ----------
 .github/workflows/check-url.yml        | 117 ++++++++++++
 .github/workflows/delete-preview.yml   |   2 +-
 .github/workflows/docker-test.yml      |  90 ++++++++++
 .github/workflows/pull_request.yml     | 237 ++++++++++---------------
 .github/workflows/render-all.yml       |  53 ++++++
 .github/workflows/render-site.yml      | 107 -----------
 7 files changed, 351 insertions(+), 352 deletions(-)
 delete mode 100644 .github/workflows/build-collection.yml
 create mode 100644 .github/workflows/check-url.yml
 create mode 100644 .github/workflows/docker-test.yml
 create mode 100644 .github/workflows/render-all.yml
 delete mode 100644 .github/workflows/render-site.yml

diff --git a/.github/workflows/build-collection.yml b/.github/workflows/build-collection.yml
deleted file mode 100644
index c78b33eb..00000000
--- a/.github/workflows/build-collection.yml
+++ /dev/null
@@ -1,97 +0,0 @@
-
-name: Build Collection
-
-on:
-  workflow_call:
-    inputs:
-      render-type:
-        required: true
-        type: string
-      repository:
-        type: string
-        required: true
-      image-name:
-        type: string
-        required: true
-    secrets:
-      gh_pat:
-        required: true
-
-jobs:
-  build-repo-collection:
-    name: Gather Repositories
-    runs-on: ubuntu-latest
-    container:
-      image: ${{ inputs.image-name }}
-
-    steps:
-      - name: Checkout files
-        uses: actions/checkout@v4
-        with:
-          fetch-depth: 0
-          token: ${{ secrets.gh_pat }}
-
-      - name: Configure git
-        run: |
-          git config --system --add safe.directory "$GITHUB_WORKSPACE"
-          git config --local user.email "itcrtrainingnetwork@gmail.com"
-          git config --local user.name "jhudsl-robot"
-        shell: bash
-
-      - name: Merge if rendering preview
-        if: ${{ inputs.render-type == 'preview' }}
-        run: |
-          branch_name='preview-${{ github.event.pull_request.number }}'
-          git fetch --all
-          git checkout $branch_name
-          git merge -s recursive --strategy-option=theirs origin/${{ github.head_ref }} --allow-unrelated-histories
-        shell: bash
-
-      - name: Checkout if main
-        if: ${{ inputs.render-type == 'main' }}
-        run: |
-          git fetch --all
-          git checkout main
-        shell: bash
-
-      - name: Query API and make repo collection
-        id: anvil_repos
-        env:
-          GH_PAT: ${{ secrets.gh_pat }}
-        run: |
-          sudo apt-get install libcurl4-openssl-dev
-
-          # Need a clean render of the collection every time
-          rm -f resources/collection.tsv
-          rm -f index.html
-
-          # Run repo check script
-          Rscript --vanilla "scripts/query_collection.R" --git_pat "$GH_PAT"
-
-      - name: Archive collection
-        uses: actions/upload-artifact@v4.6.2
-        with:
-          name: collection
-          path: resources/collection.tsv
-
-      # Commit the rendered bookdown files
-      - name: Commit collection .tsv to main
-        if: ${{ inputs.render-type == 'main' }}
-        env:
-          GH_PAT: ${{ secrets.gh_pat }}
-        run: |
-          git add --force resources/collection.tsv
-          git commit -m 'Add collection file' || echo "No changes to commit"
-          git fetch
-          git merge -s recursive --strategy-option=ours origin/main --allow-unrelated-histories
-          git push -u origin main || echo "No changes to push"
-
-      - name: Commit collection .tsv to preview
-        if: ${{ inputs.render-type == 'preview' }}
-        run: |
-          branch_name='preview-${{ github.event.pull_request.number }}'
-          git add --force resources/collection.tsv || echo "No changes to commit"
-          git commit -m 'Add collection file' || echo "No changes to commit"
-          git fetch
-          git merge -s recursive --strategy-option=theirs origin/${{ github.head_ref }} --allow-unrelated-histories
-          git push --force origin $branch_name || echo "No changes to commit"
diff --git a/.github/workflows/check-url.yml b/.github/workflows/check-url.yml
new file mode 100644
index 00000000..7c1326c5
--- /dev/null
+++ b/.github/workflows/check-url.yml
@@ -0,0 +1,117 @@
+name: Periodic URL Check
+
+on:
+  workflow_dispatch:
+  schedule:
+    - cron: '0 0 1 * *'
+
+jobs:
+  set-up:
+    name: Load user automation choices
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v3
+        with:
+          fetch-depth: 0
+
+        # Use the yaml-env-action action.
+      - name: Load environment from YAML
+        uses: doughepi/yaml-env-action@v1.0.0
+        with:
+            files: config_automation.yml # Pass a space-separated list of configuration files. Rightmost files take precedence.
+    outputs:
+      toggle_url_check_periodically: "${{ env.URL_CHECK_PERIODICALLY }}"
+
+  url-check:
+    name: Check URLs
+    needs: set-up
+    if: ${{needs.set-up.outputs.toggle_url_check_periodically == 'true'}}
+    runs-on: ubuntu-latest
+    container:
+      image: jhudsl/base_ottr:main
+
+    steps:
+    - name: Checkout
+      uses: actions/checkout@v3
+      with:
+        fetch-depth: 0
+
+    # Delete the branch if this has been run before
+    - name: Delete branch locally and remotely
+      run: git push origin --delete preview-spell-error || echo "No branch to delete"
+
+    # Make the branch fresh
+    - name: Make the branch fresh
+      run: |
+        git config --global --add safe.directory $GITHUB_WORKSPACE
+        git config --global user.name 'github-actions[bot]'
+        git config --global user.email 'github-actions[bot]@users.noreply.github.com'
+
+        echo branch doesnt exist
+        git checkout -b preview-spell-error || echo branch exists
+        git push --set-upstream origin preview-spell-error || echo echo branch exists remotely
+      shell: bash
+
+    - name: Run the check
+      uses: ottrproject/ottr-reports@main
+      id: check_results
+      continue-on-error: true
+      with:
+        check_type: urls
+        error_min: 1
+
+    - name: Declare file path and time
+      id: check-report
+      run: |
+        error_num=$(cat check_reports/url_checks.tsv | wc -l)
+        error_num="$((error_num-1))"
+        echo "error_num=$error_num" >> $GITHUB_OUTPUT
+        echo "error_url=https://github.com/${GITHUB_REPOSITORY}/blob/preview-spell-error/check_reports/url_checks.tsv" >> $GITHUB_OUTPUT
+      shell: bash
+
+    - name: Stop if failure
+      if: steps.check_results.outcome == 'failure'
+      run: exit 1
+
+    - name: Print out error variables
+      run: |
+        echo ${{ steps.check-report.outputs.error_url }}
+        echo ${{ steps.check-report.outputs.error_num }}
+
+      # Commit file
+    - name: Commit spell check file
+      if: ${{ steps.check-report.outputs.error_num >= 1 }}
+      env:
+        GH_PAT: ${{ secrets.GH_PAT }}
+      run: |
+        git add --force check_reports/url_checks.tsv
+        git commit -m 'Add spell check file' || echo "No changes to commit"
+        git push --set-upstream origin preview-spell-error || echo echo branch exists remotely
+
+    - name: Find issues
+      id: find-issue
+      env:
+        GH_PAT: ${{ secrets.GH_PAT }}
+      run: |
+        echo "$GITHUB_REPOSITORY"
+        curl -o find_issue.R https://raw.githubusercontent.com/ottrproject/ottr-reports/main/scripts/find_issue.R
+        issue_exists=$(Rscript --vanilla find_issue.R --repo $GITHUB_REPOSITORY --git_pat $GH_PAT)
+        echo URL issue exists: $issue_exists
+        echo "issue_existence=$issue_exists" >> $GITHUB_OUTPUT
+
+    - name: If too many URL errors, then make an issue
+      if: ${{ steps.check-report.outputs.error_num >= 1 && steps.find-issue.outputs.issue_existence == 0}}
+      uses: JasonEtco/create-an-issue@v2
+      with:
+        filename: .github/ISSUE_TEMPLATE/url-error.md
+      env:
+        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        FILE_URL: ${{ steps.check-report.outputs.error_url }}
+        ERROR_NUM: ${{ steps.check-report.outputs.error_num }}
+
+    - name: If no URL errors than delete the branch we made
+      if: ${{ steps.check-report.outputs.error_num < 1 }}
+      run: |
+        git config --system --add safe.directory "$GITHUB_WORKSPACE"
+        git push origin --delete preview-spell-error || echo "No branch to delete"
diff --git a/.github/workflows/delete-preview.yml b/.github/workflows/delete-preview.yml
index 88dc705a..faa83ccd 100644
--- a/.github/workflows/delete-preview.yml
+++ b/.github/workflows/delete-preview.yml
@@ -18,7 +18,7 @@ jobs:
 
       # Check out current repository
       - name: checkout
-        uses: actions/checkout@v2
+        uses: actions/checkout@v4
         with:
           fetch-depth: 0
 
diff --git a/.github/workflows/docker-test.yml b/.github/workflows/docker-test.yml
new file mode 100644
index 00000000..b1cdc472
--- /dev/null
+++ b/.github/workflows/docker-test.yml
@@ -0,0 +1,90 @@
+
+# Candace Savonen Apr 2022
+
+name: Build Docker Image
+
+on:
+  workflow_dispatch:
+    inputs:
+      directory:
+        required: true
+        type: string
+      tag:
+        required: true
+        type: string
+      dockerhubpush:
+        description: 'Push to Dockerhub?'
+        required: false
+        default: 'false'
+        type: string
+    secrets:
+      GH_PAT:
+        required: true
+      DOCKERHUB_USERNAME:
+        required: false
+      DOCKERHUB_TOKEN:
+        required: false
+
+jobs:
+
+  build-docker:
+    name: Build Docker image
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: checkout repo
+        uses: actions/checkout@v4
+
+      - name: Verify Dockerfiles changed?
+        uses: tj-actions/verify-changed-files@v17
+        id: verify-changed-files
+        with:
+          files: |
+             ${{ inputs.directory }}/Dockerfile
+             ${{ inputs.directory }}/github_package_list.tsv
+
+      - name: Login as jhudsl-robot
+        run: |
+          git config --local user.email "itcrtrainingnetwork@gmail.com"
+          git config --local user.name "jhudsl-robot"
+
+      # Set up Docker build
+      - name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v1
+
+      # Setup layer cache
+      - name: Cache Docker layers
+        uses: actions/cache@v2
+        with:
+          path: /tmp/.buildx-cache
+          key: ${{ runner.os }}-buildx-${{ github.sha }}
+          restore-keys: |
+            ${{ runner.os }}-buildx-
+
+      - name: Set up Docker Build
+        uses: docker/setup-buildx-action@v1
+
+      - name: Get token
+        run: echo ${{ secrets.GH_PAT }} > ${{ inputs.directory }}/git_token.txt
+
+      - name: Build Docker image
+        uses: docker/build-push-action@v2
+        with:
+          push: false
+          load: true
+          context: ${{ inputs.directory }}
+          file: ${{ inputs.directory }}/Dockerfile
+          tags: ${{ inputs.tag }}
+
+      # Login to Dockerhub
+      - name: Login to DockerHub
+        if: ${{ inputs.dockerhubpush != 'false' }}
+        uses: docker/login-action@v1
+        with:
+          username: ${{ secrets.DOCKERHUB_USERNAME }}
+          password: ${{ secrets.DOCKERHUB_TOKEN }}
+
+      # Push the Docker image if set to true from a manual trigger
+      - name: Push Docker image if manual trigger set to true
+        if: ${{ inputs.dockerhubpush != 'false' }}
+        run: docker push ${{ inputs.tag }}
diff --git a/.github/workflows/pull_request.yml b/.github/workflows/pull_request.yml
index 7a82f735..9b3ece7a 100644
--- a/.github/workflows/pull_request.yml
+++ b/.github/workflows/pull_request.yml
@@ -1,5 +1,5 @@
-# Candace Savonen Dec 2021
-# Updated May 2023
+# Candace Savonen 2021
+# Updated May 2025
 
 name: Pull Request
 
@@ -31,76 +31,67 @@ jobs:
       # Make the branch fresh
       - name: Make the branch fresh
         run: |
-          git config --global --add safe.directory ${GITHUB_WORKSPACE}
-          git config --global user.email "itcrtrainingnetwork@gmail.com"
-          git config --global user.name "jhudsl-robot"
+          git config --global --add safe.directory $GITHUB_WORKSPACE
+          git config --global user.name 'github-actions[bot]'
+          git config --global user.email 'github-actions[bot]@users.noreply.github.com'
+
           branch_name='preview-${{ github.event.pull_request.number }}'
           echo branch doesnt exist
           git checkout -b $branch_name || echo branch exists
-          git push --set-upstream origin $branch_name
+          git push --set-upstream origin $branch_name || echo branch exists remotely
         shell: bash
 
-      - name: Check if this is a private repository
-        id: public_repository
-        run: |
-          public=$(curl -Is https://github.com/${GITHUB_REPOSITORY} | head -1 | tr -dc '0-9')
-          if [ $public -eq 2200 ];then
-            public='true'
-            echo 'public repository'
-          else
-            public='false'
-            echo 'private repository'
-          fi
-          echo ::set-output name=public::$public
-        shell: bash
 
     outputs:
-      public_repository: "${{ steps.public_repository.outputs.public }}"
+      toggle_website: "${{ env.RENDER_WEBSITE }}"
       toggle_spell_check: "${{ env.SPELL_CHECK }}"
+      spell_error_min: "${{ env.SPELL_ERROR_MIN }}"
+      toggle_style_code: "${{ env.STYLE_CODE }}"
       toggle_url_check: "${{ env.URL_CHECKER }}"
+      url_error_min: "${{ env.URL_ERROR_MIN }}"
+      toggle_quiz_check: "${{ env.CHECK_QUIZZES }}"
+      quiz_error_min: "${{ env.QUIZ_ERROR_MIN }}"
+      toggle_md_linter: "${{ env.MARKDOWN_LINTER }}"
+      toggle_readability: "${{ env.READABILITY_REPORT }}"
       toggle_render_preview: "${{ env.RENDER_PREVIEW }}"
+      toggle_dictionary_sort: "${{ env.DICTIONARY_SORT }}"
       rendering_docker_image: "${{ env.RENDERING_DOCKER_IMAGE }}"
 
-  build-collection:
-    name: Build Collection
-    needs: yaml-check
-    uses: ./.github/workflows/build-collection.yml
-    with:
-      render-type: 'preview'
-      repository: $GITHUB_REPOSITORY
-      image-name: ${{needs.yaml-check.outputs.rendering_docker_image}}
-    secrets:
-      gh_pat: ${{ secrets.GH_PAT }}
-
-  spell-check:
-    name: Check spelling
+########################## Make the error reports ##############################
+  ottr-reports:
+    name: Run Reports
     needs: yaml-check
-    if: ${{needs.yaml-check.outputs.toggle_spell_check == 'yes'}}
-    uses: jhudsl/ottr-reports/.github/workflows/report-maker.yml@main
-    with:
-      check_type: spelling
-      error_min: 3
-    secrets:
-      gh_pat: ${{ secrets.GH_PAT }}
-
-  url-check:
-    name: Check URLs
+    if: ${{needs.yaml-check.outputs.toggle_spell_check == 'true' || needs.yaml-check.outputs.toggle_url_check == 'true' || needs.yaml-check.outputs.toggle_quiz_check == 'true'}}
+    runs-on: ubuntu-latest
+    permissions:
+      pull-requests: write
+
+    steps:
+    - name: Checkout Actions Repository
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+
+    - name: Run Reports
+      id: run-reports
+      uses: ottrproject/ottr-reports@main
+      with:
+        check_spelling: ${{needs.yaml-check.outputs.toggle_spell_check}}
+        spelling_error_min: ${{needs.yaml-check.outputs.spell_error_min}}
+        check_urls: ${{needs.yaml-check.outputs.toggle_url_check}}
+        url_error_min: ${{needs.yaml-check.outputs.url_error_min}}
+        check_quiz_form: ${{needs.yaml-check.outputs.toggle_quiz_check}}
+        quiz_error_min: ${{needs.yaml-check.outputs.quiz_error_min}}
+        sort_dictionary: ${{needs.yaml-check.outputs.toggle_dictionary_sort}}
+
+############################# Style the code ###################################
+  style-code:
+    name: Style code
     needs: yaml-check
-    if: ${{needs.yaml-check.outputs.toggle_url_check == 'yes'}}
-    uses: jhudsl/ottr-reports/.github/workflows/report-maker.yml@main
-    with:
-      check_type: urls
-      error_min: 0
-    secrets:
-      gh_pat: ${{ secrets.GH_PAT }}
-      
-  render-preview:
-    name: Render preview
-    needs: [yaml-check, build-collection]
     runs-on: ubuntu-latest
+    if: ${{needs.yaml-check.outputs.toggle_style_code == 'true'}}
     container:
-      image: ${{needs.yaml-check.outputs.rendering_docker_image}}
-    if: ${{needs.yaml-check.outputs.toggle_render_preview == 'yes'}}
+      image: jhudsl/base_ottr:main
 
     steps:
       - name: Checkout files
@@ -108,102 +99,54 @@ jobs:
         with:
           fetch-depth: 0
 
-      # Set up git checkout
-      - name: Set up git checkout
+      - name: Run styler
+        run: Rscript -e "styler::style_file(list.files(pattern = '(R|q)md$', recursive = FALSE, full.names = TRUE));warnings()"
+
+      - name: Commit styled files
         run: |
           git config --system --add safe.directory "$GITHUB_WORKSPACE"
-          git config --local user.email "itcrtrainingnetwork@gmail.com"
-          git config --local user.name "jhudsl-robot"
-          branch_name='preview-${{ github.event.pull_request.number }}'
-          git fetch --all
-          git checkout $branch_name
-          git merge -s recursive --strategy-option=theirs origin/${{ github.head_ref }} --allow-unrelated-histories
-        shell: bash
-      
-      # We want a fresh run of the renders each time
-      - name: Delete old docs/*
-        run: rm -rf docs/*
-      
-      # Now we want to render Rmd -> html
-      - name: Convert Rmd to html
-        id: bookdown
-        run: |
-          Rscript scripts/build.R
-
-      # Run TOC-less version
-      # Rendered content for Leanpub and Coursera is very similar.
-      # This job creates a shared scaffold for both.
-      - name: Run TOC-less version of render
-        id: tocless
-        run: Rscript -e "devtools::install_github('jhudsl/ottrpal', upgrade = 'never'); ottrpal::render_without_toc()"
-        env:
-          GITHUB_PAT: ${{ secrets.GH_PAT }}
-
-      # This checks on the steps before it and makes sure that they completed.
-      # If the renders didn't complete we don't want to commit the file changes
-      - name: Check on render steps
-        if: steps.bookdown.outcome != 'success' || steps.tocless.outcome != 'success'
-        run: |
-          echo Bookdown status ${{steps.bookdown.outcome}}
-          echo Toc-less status ${{steps.tocless.outcome}}
-          exit 1
+          git add \*md
+          git commit -m 'Style *mds' || echo "No changes to commit"
+          git push origin || echo "No changes to commit"
 
-      # Commit the rendered bookdown files
-      - name: Commit rendered bookdown files to preview branch
-        id: commit
-        run: |
-          branch_name='preview-${{ github.event.pull_request.number }}'
-          git diff origin/main -- docs >/dev/null && changes=true || changes=false
-          echo "changes=$changes" >> $GITHUB_OUTPUT
-          git add . --force
-          git commit -m 'Render preview' || echo "No changes to commit"
-          git pull --set-upstream origin $branch_name --allow-unrelated-histories --strategy-option=ours
-          git push --force || echo "No changes to commit"
-        shell: bash
+############################# Readability Report ###################################
 
-      - name: Find Comment
-        uses: peter-evans/find-comment@v2
-        id: fc
-        with:
-          issue-number: ${{ github.event.pull_request.number }}
-          comment-author: 'github-actions[bot]'
-          body-includes: latest commit
+  readability-report:
+    name: Readability report
+    needs: yaml-check
+    runs-on: ubuntu-latest
+    if: ${{needs.yaml-check.outputs.toggle_readability == 'true'}}
 
-      - name: Build components of the comment
-        id: build-components
-        run: |
-          course_name=$(head -n 1 _bookdown.yml | cut -d'"' -f 2| tr " " "-")
-          bookdown_link=$(echo "https://htmlpreview.github.io/?https://raw.githubusercontent.com/$GITHUB_REPOSITORY/preview-${{ github.event.pull_request.number }}/docs/index.html")
-          tocless_link=$(echo "https://htmlpreview.github.io/?https://raw.githubusercontent.com/$GITHUB_REPOSITORY/preview-${{ github.event.pull_request.number }}/docs/no_toc/index.html")
-          echo "bookdown_link=$bookdown_link" >> $GITHUB_OUTPUT
-          echo "tocless_link=$tocless_link" >> $GITHUB_OUTPUT
-          echo "time=$(date +'%Y-%m-%d')" >> $GITHUB_OUTPUT
-          echo "commit_id=$GITHUB_SHA" >> $GITHUB_OUTPUT
-          echo ${{steps.commit.outputs.changes}}
-
-      - name: Create or update comment
-        if: steps.commit.outputs.changes == 'true'
-        uses: peter-evans/create-or-update-comment@v2
+    steps:
+      - name: Checkout repo
+        uses: actions/checkout@v4
         with:
-          comment-id: ${{ steps.fc.outputs.comment-id }}
-          issue-number: ${{ github.event.pull_request.number }}
-          body: |
-            Re-rendered previews from the latest commit:
-            - See [preview of Bookdown here](${{ steps.build-components.outputs.bookdown_link }})
-            - See [preview of Coursera/Leanpub version here](${{ steps.build-components.outputs.tocless_link }})
-            _Note that `DT::datatable()` content does not appear in preview._
-
-            _Updated at ${{ steps.build-components.outputs.time }} with changes from ${{ steps.build-components.outputs.commit_id }}_
-          edit-mode: replace
-
-      - name: Comment if no changes
-        if: steps.commit.outputs.changes == 'false'
-        uses: peter-evans/create-or-update-comment@v2
+          fetch-depth: 0
+
+      - name: Readability report
+        uses: Rebilly/lexi@v2
         with:
-          comment-id: ${{ steps.fc.outputs.comment-id }}
-          issue-number: ${{ github.event.pull_request.number }}
-          body: |
-            The latest commit did not produce rendering changes.
+          github-token: ${{ secrets.GH_PAT }}
+          glob: '**/*.md'
 
-            _Updated at ${{ steps.build-components.outputs.time }} with changes from ${{ steps.build-components.outputs.commit_id }}_
-          edit-mode: replace
+############################# Render Preview ###################################
+  render-preview:
+    name: Render preview
+    needs: yaml-check
+    runs-on: ubuntu-latest
+    if: ${{needs.yaml-check.outputs.toggle_render_preview == 'true'}}
+    permissions:
+      pull-requests: write
+      contents: write
+
+    steps:
+    - name: Checkout repo
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+
+    - name: Run render
+      uses: ottrproject/ottr-preview@main
+      with:
+        toggle_website: ${{needs.yaml-check.outputs.toggle_website}}
+        docker_image: ${{needs.yaml-check.outputs.rendering_docker_image}}
diff --git a/.github/workflows/render-all.yml b/.github/workflows/render-all.yml
new file mode 100644
index 00000000..344b523e
--- /dev/null
+++ b/.github/workflows/render-all.yml
@@ -0,0 +1,53 @@
+# Candace Savonen 2021
+# Updated April 2025
+
+name: Render website
+
+on:
+  workflow_dispatch:
+  push:
+    branches: [ main, staging ]
+    paths:
+      - '*.qmd'
+      - '*.Rmd'
+      - assets/*
+      - quizzes/*
+
+jobs:
+
+  yaml-check:
+    name: Load user automation choices
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+        # Use the yaml-env-action action.
+      - name: Load environment from YAML
+        uses: doughepi/yaml-env-action@v1.0.0
+        with:
+            files: config_automation.yml # Pass a space-separated list of configuration files. Rightmost files take precedence.
+    outputs:
+      toggle_website: "${{ env.RENDER_WEBSITE }}"
+      rendering_docker_image: "${{ env.RENDERING_DOCKER_IMAGE }}"
+
+  render-website:
+    name: Render website
+    needs: yaml-check
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: checkout
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+          token: ${{ secrets.GH_PAT }}
+
+      - name: Run render
+        id: render
+        uses: ottrproject/ottr-preview@main
+        with:
+          toggle_website: ${{needs.yaml-check.outputs.toggle_website}}
+          preview: false
+          token: ${{ secrets.GH_PAT }}
+          docker_image: ${{needs.yaml-check.outputs.rendering_docker_image}}
diff --git a/.github/workflows/render-site.yml b/.github/workflows/render-site.yml
deleted file mode 100644
index 9db48916..00000000
--- a/.github/workflows/render-site.yml
+++ /dev/null
@@ -1,107 +0,0 @@
-
-# It was adapted by Candace Savonen for the OTTR_template https://github.com/jhudsl/OTTR_Template.
-
-# This code was adapted by Carrie Wright to enable automated rendering of the site associated with this repository
-
-# +---------------- minute (0 - 59)
-# |  +------------- hour (0 - 23)
-# |  |  +---------- day of month (1 - 31)
-# |  |  |  +------- month (1 - 12)
-# |  |  |  |  +---- day of week (0 - 6) (Sunday=0 or 7)
-# |  |  |  |  |
-# *  *  *  *  *  command to be executed
-
-name: Render html
-
-on:
-  workflow_dispatch:
-  schedule:
-  - cron: "0 3 * * 0"
-  push:
-    branches:
-      - main
-    paths:
-      - '**.Rmd'
-      - collection.tsv
-
-jobs:
-  yaml-check:
-    name: Load user automation choices
-    runs-on: ubuntu-latest
-    steps:
-      - name: Checkout
-        uses: actions/checkout@v4
-
-        # Use the yaml-env-action action.
-      - name: Load environment from YAML
-        uses: doughepi/yaml-env-action@v1.0.0
-        with:
-            files: config_automation.yml # Pass a space-separated list of configuration files. Rightmost files take precedence.
-    outputs:
-      toggle_bookdown: "${{ env.RENDER_BOOKDOWN }}"
-      toggle_coursera: "${{ env.RENDER_COURSERA }}"
-      toggle_leanpub: "${{ env.RENDER_LEANPUB }}"
-      make_book_txt: "${{ env.MAKE_BOOK_TXT }}"
-      rendering_docker_image: "${{ env.RENDERING_DOCKER_IMAGE }}"
-      toggle_quiz_check: "${{ env.CHECK_QUIZZES }}"
-
-  build-collection:
-    name: Build Collection
-    needs: yaml-check
-    uses: ./.github/workflows/build-collection.yml
-    with:
-      render-type: 'main'
-      repository: $GITHUB_REPOSITORY
-      image-name: ${{needs.yaml-check.outputs.rendering_docker_image}}
-    secrets:
-      gh_pat: ${{ secrets.GH_PAT }}
-
-  render-main:
-    runs-on: ubuntu-latest
-          # install.packages("remotes") # in case we decide not to go with the container...
-          # remotes::install_cran("rmarkdown")
-          # remotes::install_deps(dependencies = TRUE)
-    needs: [yaml-check, build-collection]
-    container:
-      image: ${{needs.yaml-check.outputs.rendering_docker_image}}
-    # Steps represent a sequence of tasks that will be executed as part of the job
-    steps:
-      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
-      - name: checkout
-        uses: actions/checkout@v4
-        with:
-          # get the full repo
-          fetch-depth: 0
-          # use github PAT
-          token: ${{ secrets.GH_PAT }}
-
-      # We want a fresh run of the renders each time
-      - name: Delete old docs/*
-        run: rm -rf docs/*
-
-      # Now we want to render Rmd -> html
-      - name: Convert Rmd to html
-        id: bookdown
-        run: |
-          Rscript scripts/build.R
-
-      # Run TOC-less version
-      # Rendered content for Leanpub and Coursera is very similar.
-      # This job creates a shared scaffold for both.
-      - name: Run TOC-less version of render
-        id: tocless
-        run: Rscript -e "devtools::install_github('jhudsl/ottrpal', upgrade = 'never'); ottrpal::render_without_toc()"
-        env:
-          GITHUB_PAT: ${{ secrets.gh_pat }}
-
-      # Commit the rendered site files - html files and site_libs files
-      - name: Commit rendered site files
-        run: |
-          git config --global --add safe.directory ${GITHUB_WORKSPACE}
-          git config --local user.email "actions@github.com"
-          git config --local user.name "GitHub Actions"
-          git config --global pull.ff true
-          git add . --force
-          git commit -m 'Render site' || echo "No changes to commit"
-          git pull --allow-unrelated-histories --strategy-option=ours
-          git push origin main || echo "No changes to push"

From 4996cd3b0fd532b9c74c719191ec8404a2159a8f Mon Sep 17 00:00:00 2001
From: jhudsl-robot <null>
Date: Fri, 6 Jun 2025 21:06:31 +0000
Subject: [PATCH 2/3] =?UTF-8?q?=F0=9F=94=84=20Created=20local=20'.github/w?=
 =?UTF-8?q?orkflows/render-site.yml'=20from=20remote=20'.github/workflows/?=
 =?UTF-8?q?render-all.yml'?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

release-renderActionTry2
---
 .github/workflows/render-site.yml | 53 +++++++++++++++++++++++++++++++
 1 file changed, 53 insertions(+)
 create mode 100644 .github/workflows/render-site.yml

diff --git a/.github/workflows/render-site.yml b/.github/workflows/render-site.yml
new file mode 100644
index 00000000..344b523e
--- /dev/null
+++ b/.github/workflows/render-site.yml
@@ -0,0 +1,53 @@
+# Candace Savonen 2021
+# Updated April 2025
+
+name: Render website
+
+on:
+  workflow_dispatch:
+  push:
+    branches: [ main, staging ]
+    paths:
+      - '*.qmd'
+      - '*.Rmd'
+      - assets/*
+      - quizzes/*
+
+jobs:
+
+  yaml-check:
+    name: Load user automation choices
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+        # Use the yaml-env-action action.
+      - name: Load environment from YAML
+        uses: doughepi/yaml-env-action@v1.0.0
+        with:
+            files: config_automation.yml # Pass a space-separated list of configuration files. Rightmost files take precedence.
+    outputs:
+      toggle_website: "${{ env.RENDER_WEBSITE }}"
+      rendering_docker_image: "${{ env.RENDERING_DOCKER_IMAGE }}"
+
+  render-website:
+    name: Render website
+    needs: yaml-check
+    runs-on: ubuntu-latest
+
+    steps:
+      - name: checkout
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+          token: ${{ secrets.GH_PAT }}
+
+      - name: Run render
+        id: render
+        uses: ottrproject/ottr-preview@main
+        with:
+          toggle_website: ${{needs.yaml-check.outputs.toggle_website}}
+          preview: false
+          token: ${{ secrets.GH_PAT }}
+          docker_image: ${{needs.yaml-check.outputs.rendering_docker_image}}

From 89a595b1ff546f672d1ce1c0f1432203727f9031 Mon Sep 17 00:00:00 2001
From: jhudsl-robot <null>
Date: Fri, 6 Jun 2025 21:06:31 +0000
Subject: [PATCH 3/3] =?UTF-8?q?=F0=9F=94=84=20Synced=20local=20'config=5Fa?=
 =?UTF-8?q?utomation.yml'=20with=20remote=20'config=5Fautomation.yml'?=
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

release-renderActionTry2
---
 config_automation.yml | 36 +++++++++++++++++++++---------------
 1 file changed, 21 insertions(+), 15 deletions(-)

diff --git a/config_automation.yml b/config_automation.yml
index 9491650b..3bf069a8 100644
--- a/config_automation.yml
+++ b/config_automation.yml
@@ -1,28 +1,34 @@
 
+### Render preview of content with changes (Rmd's and md's are checked)
+render-preview: true
+
 ##### Checks run at pull request #####
 # Check quiz formatting
-check-quizzes: no
+check-quizzes: false
+quiz_error_min: 0
 # Check that urls in the content are not broken
-url-checker: yes
-# Render preview of content with changes (Rmd's and md's are checked)
-render-preview: yes
+url-checker: true
+url_error_min: 0
 # Spell check Rmds and quizzes
-spell-check: yes
+spell-check: true
+spell_error_min: 0
+
+#### Other options
 # Style any R code
-style-code: yes
+style-code: true
+# Would you like your markdown files to be checked for formatting
+markdown-linter: true
+# Would you like a readability report on your markdowns?
+readability-report: true
 # Test build the docker image if any docker-relevant files have been changed
-docker-test: no
+docker-test: false
+# Should URLs be tested periodically?
+url-check-periodically: true
 
 ##### Renderings run upon merge to main branch #####
 # Rendering each platform's content
-render-bookdown: yes
-render-leanpub: no
-render-coursera: no
-
-## Automate the creation of Book.txt file? TRUE/FALSE?
-## This is only relevant if render-leanpub is yes, otherwise it will be ignored
-make-book-txt: FALSE
+render-website: rmd_web
 
 # What docker image should be used for rendering?
 # The default is jhudsl/base_ottr:main
-rendering-docker-image: 'jhudsl/base_ottr:tidy4.3.2'
+rendering-docker-image: 'jhudsl/base_ottr:main'