Merge pull request #2429 from jguillon/fix/dwi2response

[FIX] Fix issue #2408

Author: mgxd

nipype/interfaces/mrtrix3/preprocess.py

@@ -27,7 +27,7 @@ class ResponseSDInputSpec(MRTrix3BaseInputSpec):
         'tournier',
         'tax',
         argstr='%s',
-        position=-6,
+        position=1,
         mandatory=True,
         desc='response estimation algorithm (multi-tissue)')
     in_file = File(
@@ -74,7 +74,7 @@ class ResponseSD(MRTrix3Base):
     >>> resp.inputs.algorithm = 'tournier'
     >>> resp.inputs.grad_fsl = ('bvecs', 'bvals')
     >>> resp.cmdline                               # doctest: +ELLIPSIS
-    'dwi2response -fslgrad bvecs bvals tournier dwi.mif wm.txt'
+    'dwi2response tournier -fslgrad bvecs bvals dwi.mif wm.txt'
     >>> resp.run()                                 # doctest: +SKIP
     """
 

nipype/interfaces/mrtrix3/tests/test_auto_ResponseSD.py

@@ -8,7 +8,7 @@ def test_ResponseSD_inputs():
         algorithm=dict(
             argstr='%s',
             mandatory=True,
-            position=-6,
+            position=1,
         ),
         args=dict(argstr='%s', ),
         bval_scale=dict(argstr='-bvalue_scaling %s', ),