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lines changed Original file line number Diff line number Diff line change 1212from .utils import *
1313
1414
15- def all_fmb_pipeline (name = 'hmc_sdc_ecc' ,
16- fugue_params = dict (smooth3d = 2.0 ),
17- bmap_params = dict (delta_te = 2.46e-3 ),
18- epi_params = dict (echospacing = 0.77e-3 ,
19- acc_factor = 3 ,
20- enc_dir = 'y-' )):
15+ def all_fmb_pipeline (name = 'hmc_sdc_ecc' , fugue_params = dict (smooth3d = 2.0 )):
2116 """
2217 Builds a pipeline including three artifact corrections: head-motion
2318 correction (HMC), susceptibility-derived distortion correction (SDC),
@@ -62,8 +57,7 @@ def all_fmb_pipeline(name='hmc_sdc_ecc',
6257 name = 'bet_dwi_post' )
6358
6459 hmc = hmc_pipeline ()
65- sdc = sdc_fmb (fugue_params = fugue_params , bmap_params = bmap_params ,
66- epi_params = epi_params )
60+ sdc = sdc_fmb (fugue_params = fugue_params )
6761 ecc = ecc_pipeline ()
6862 unwarp = apply_all_corrections ()
6963
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