update workflows

Author: jan-janssen

workflow_nfdi.json

@@ -1,13 +1,13 @@
 {
-  "nodes": {
-    "0": "nfdi_ing_workflow.generate_mesh",
-    "1": "nfdi_ing_workflow.convert_to_xdmf",
-    "2": "nfdi_ing_workflow.poisson",
-    "3": "nfdi_ing_workflow.plot_over_line",
-    "4": "nfdi_ing_workflow.substitute_macros",
-    "5": "nfdi_ing_workflow.compile_paper",
-    "6": 2.0
-  },
+  "nodes": [
+    {"id": 0, "value": "nfdi_ing_workflow.generate_mesh"},
+    {"id": 1, "value": "nfdi_ing_workflow.convert_to_xdmf"},
+    {"id": 2, "value": "nfdi_ing_workflow.poisson"},
+    {"id": 3, "value": "nfdi_ing_workflow.plot_over_line"},
+    {"id": 4, "value": "nfdi_ing_workflow.substitute_macros"},
+    {"id": 5, "value": "nfdi_ing_workflow.compile_paper"},
+    {"id": 6, "value": 2.0}
+  ],
   "edges": [
     {"tn": 0, "th": "domain_size", "sn": 6, "sh": null},
     {"tn": 1, "th": "gmsh_output_file", "sn": 0, "sh": null},

workflow_qe.json

@@ -1,38 +1,38 @@
 {
-  "nodes": {
-    "0": "quantum_espresso_workflow.get_bulk_structure",
-    "1": "quantum_espresso_workflow.calculate_qe",
-    "2": "quantum_espresso_workflow.generate_structures",
-    "3": "quantum_espresso_workflow.calculate_qe",
-    "4": "quantum_espresso_workflow.calculate_qe",
-    "5": "quantum_espresso_workflow.calculate_qe",
-    "6": "quantum_espresso_workflow.calculate_qe",
-    "7": "quantum_espresso_workflow.calculate_qe",
-    "8": "quantum_espresso_workflow.plot_energy_volume_curve",
-    "9": "Al",
-    "10": 4.05,
-    "11": true,
-    "12": "mini",
-    "13": "python_workflow_definition.shared.get_dict",
-    "14": {"Al": "Al.pbe-n-kjpaw_psl.1.0.0.UPF"},
-    "15": [3, 3, 3],
-    "16": "vc-relax",
-    "17": 0.02,
-    "18": [0.9, 0.95, 1.0, 1.05, 1.1],
-    "19": "strain_0",
-    "20": "python_workflow_definition.shared.get_dict",
-    "21": "scf",
-    "22": "strain_1",
-    "23": "python_workflow_definition.shared.get_dict",
-    "24": "strain_2",
-    "25": "python_workflow_definition.shared.get_dict",
-    "26": "strain_3",
-    "27": "python_workflow_definition.shared.get_dict",
-    "28": "strain_4",
-    "29": "python_workflow_definition.shared.get_dict",
-    "30": "python_workflow_definition.shared.get_list",
-    "31": "python_workflow_definition.shared.get_list"
-  },
+  "nodes": [
+    {"id": 0, "value": "quantum_espresso_workflow.get_bulk_structure"},
+    {"id": 1, "value": "quantum_espresso_workflow.calculate_qe"},
+    {"id": 2, "value": "quantum_espresso_workflow.generate_structures"},
+    {"id": 3, "value": "quantum_espresso_workflow.calculate_qe"},
+    {"id": 4, "value": "quantum_espresso_workflow.calculate_qe"},
+    {"id": 5, "value": "quantum_espresso_workflow.calculate_qe"},
+    {"id": 6, "value": "quantum_espresso_workflow.calculate_qe"},
+    {"id": 7, "value": "quantum_espresso_workflow.calculate_qe"},
+    {"id": 8, "value": "quantum_espresso_workflow.plot_energy_volume_curve"},
+    {"id": 9, "value": "Al"},
+    {"id": 10, "value": 4.05},
+    {"id": 11, "value": true},
+    {"id": 12, "value": "mini"},
+    {"id": 13, "value": "python_workflow_definition.shared.get_dict"},
+    {"id": 14, "value": {"Al": "Al.pbe-n-kjpaw_psl.1.0.0.UPF"}},
+    {"id": 15, "value": [3, 3, 3]},
+    {"id": 16, "value": "vc-relax"},
+    {"id": 17, "value": 0.02},
+    {"id": 18, "value": [0.9, 0.95, 1.0, 1.05, 1.1]},
+    {"id": 19, "value": "strain_0"},
+    {"id": 20, "value": "python_workflow_definition.shared.get_dict"},
+    {"id": 21, "value": "scf"},
+    {"id": 22, "value": "strain_1"},
+    {"id": 23, "value": "python_workflow_definition.shared.get_dict"},
+    {"id": 24, "value": "strain_2"},
+    {"id": 25, "value": "python_workflow_definition.shared.get_dict"},
+    {"id": 26, "value": "strain_3"},
+    {"id": 27, "value": "python_workflow_definition.shared.get_dict"},
+    {"id": 28, "value": "strain_4"},
+    {"id": 29, "value": "python_workflow_definition.shared.get_dict"},
+    {"id": 30, "value": "python_workflow_definition.shared.get_list"},
+    {"id": 31, "value": "python_workflow_definition.shared.get_list"}
+  ],
   "edges": [
     {"tn": 0, "th": "element", "sn": 9, "sh": null},
     {"tn": 0, "th": "a", "sn": 10, "sh": null},