From c36d43d3b99c64d244bcb8de75ae5663176e9928 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:08:14 +0100 Subject: [PATCH 1/8] Update dependencies --- binder/environment.yml | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/binder/environment.yml b/binder/environment.yml index 7faa74f..578558f 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -2,16 +2,16 @@ channels: - conda-forge dependencies: - python =3.12 -- click =8.1.8 -- pydantic =2.12.3 +- click =8.2.1 +- pydantic =2.12.4 - hatchling =1.27.0 - httpcore =1.0.7 -- jobflow =0.2.0 -- pyiron_base =0.15.5 +- jobflow =0.2.1 +- pyiron_base =0.15.10 - pyiron_workflow =0.15.4 - pygraphviz =1.14 -- aiida-workgraph =0.7.4 -- plumpy =0.25.0 -- conda_subprocess =0.0.7 -- networkx =3.4.2 -- cwltool =3.1.20250110105449 +- aiida-workgraph =0.7.6 +- plumpy =0.25.1 +- conda_subprocess =0.0.10 +- networkx =3.6 +- cwltool =3.1.20251031082601 From e1bb18344981c4aa585289b5353bf3f23bbae223 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:09:47 +0100 Subject: [PATCH 2/8] Update pyproject.toml --- pyproject.toml | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index b2b0c9f..443fc02 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -16,22 +16,22 @@ authors = [ ] license = { file = "LICENSE" } dependencies = [ - "numpy>=1.21,<2", - "pydantic>=2.7.0,<=2.12.3", + "numpy>=1.21", + "pydantic>=2.7.0,<=2.12.4", ] [project.optional-dependencies] aiida = [ - "aiida-workgraph>=0.5.1,<=0.7.4", + "aiida-workgraph>=0.5.1,<=0.7.6", ] jobflow = [ - "jobflow>=0.1.18,<=0.2.0", + "jobflow>=0.1.18,<=0.2.1", ] pyiron = [ - "pyiron_base>=0.11.10,<=0.15.5", + "pyiron_base>=0.11.10,<=0.15.10", ] plot = [ "pygraphviz>=1.10,<=1.14", - "networkx>=2.8.8,<=3.5", - "ipython>=7.33.0,<=9.0.2", + "networkx>=2.8.8,<=3.6", + "ipython>=7.33.0,<=9.8.0", ] From 65fdad81476e263391a23de48531e83a20617d2d Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:10:33 +0100 Subject: [PATCH 3/8] Update pyproject.toml --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 443fc02..94000c3 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -32,6 +32,6 @@ pyiron = [ ] plot = [ "pygraphviz>=1.10,<=1.14", - "networkx>=2.8.8,<=3.6", + "networkx>=2.8.8,<=3.5", "ipython>=7.33.0,<=9.8.0", ] From a9d5bb4ba30ae49245fc17bf7997608146495287 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:10:50 +0100 Subject: [PATCH 4/8] Update environment.yml --- binder/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index 578558f..931f204 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -13,5 +13,5 @@ dependencies: - aiida-workgraph =0.7.6 - plumpy =0.25.1 - conda_subprocess =0.0.10 -- networkx =3.6 +- networkx =3.5 - cwltool =3.1.20251031082601 From 8ccaa2a653329e60e6a7133010c5ea16e2e213f2 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:11:47 +0100 Subject: [PATCH 5/8] Update environment.yml --- binder/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index 931f204..3f9e70d 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -11,7 +11,7 @@ dependencies: - pyiron_workflow =0.15.4 - pygraphviz =1.14 - aiida-workgraph =0.7.6 -- plumpy =0.25.1 +- plumpy =0.25.0 - conda_subprocess =0.0.10 - networkx =3.5 - cwltool =3.1.20251031082601 From 0651fc9af49e136a15a2ea13dbd0f4753e3004c5 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:12:54 +0100 Subject: [PATCH 6/8] Update environment.yml --- binder/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index 3f9e70d..26a8270 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -13,5 +13,5 @@ dependencies: - aiida-workgraph =0.7.6 - plumpy =0.25.0 - conda_subprocess =0.0.10 -- networkx =3.5 +- networkx =3.4.2 - cwltool =3.1.20251031082601 From c881e3547faa6c9c11f00b0295dc6a5dab40ed1a Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:14:24 +0100 Subject: [PATCH 7/8] Update environment.yml --- binder/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/binder/environment.yml b/binder/environment.yml index 26a8270..357b297 100644 --- a/binder/environment.yml +++ b/binder/environment.yml @@ -2,7 +2,7 @@ channels: - conda-forge dependencies: - python =3.12 -- click =8.2.1 +- click =8.1.8 - pydantic =2.12.4 - hatchling =1.27.0 - httpcore =1.0.7 From 6bcf029d97d2c25f3232163a39af646683ec2b58 Mon Sep 17 00:00:00 2001 From: Jan Janssen Date: Thu, 4 Dec 2025 12:18:30 +0100 Subject: [PATCH 8/8] Update environment.yml --- documentation/environment.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/documentation/environment.yml b/documentation/environment.yml index ffdaf20..4450676 100644 --- a/documentation/environment.yml +++ b/documentation/environment.yml @@ -1,4 +1,4 @@ channels: - conda-forge dependencies: -- jupyter-book \ No newline at end of file +- jupyter-book <2