Release 0.5.0 #320
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Release 0.5.0 #320
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For now just imports from v1
- Use `copy` of conditions DataFrame for inplace sorting - closes PEtab-dev#304 --------- Co-authored-by: Dilan Pathirana <59329744+dilpath@users.noreply.github.com>
…Etab-dev#309) Reformulate the given PEtab problem such that the objective priors are converted to measurements. This is done by adding a new observable for each prior and adding a corresponding measurement to the measurement table. The resulting optimization problem will be equivalent to the original problem. This is meant to be used for tools that do not support priors. Closes PEtab-dev#307 --------- Co-authored-by: Dilan Pathirana <59329744+dilpath@users.noreply.github.com>
petab.v1.priors was not included in the documentation.
Appending instead of preprending the new observables/measurements will preserve the column order.
If no ID is given, use `pysb.Model.name` as fallback. As is already the case for SbmlModel and its `id` attribute.
Include the model ID in `Model.__repr__`.
* Remove the visualization table if it has observables that are not in the flattened observable table. Co-authored-by: Dilan Pathirana <59329744+dilpath@users.noreply.github.com>
Codecov ReportAttention: Patch coverage is
Additional details and impacted files@@ Coverage Diff @@
## main #320 +/- ##
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- Coverage 72.87% 72.79% -0.08%
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Files 47 52 +5
Lines 4836 4907 +71
Branches 1035 841 -194
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+ Hits 3524 3572 +48
- Misses 1014 1028 +14
- Partials 298 307 +9 ☔ View full report in Codecov by Sentry. 🚀 New features to boost your workflow:
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