Update template to 1.3.8

CHANGELOG.md

@@ -2,6 +2,13 @@
 
 Reference: common-changelog.org
 
+## 1.3.8 - 2025-11-17
+
+### Changed
+
+- Inherit secrets in GitHub Actions workflows where appropriate
+- Add commented out ORCID plugin code to discard source if no ID
+
 ## 1.3.7 - 2025-07-31
 
 ### Changed

CITATION.cff

@@ -1,8 +1,8 @@
 # citation metadata for the template itself
 
 title: "Lab Website Template"
-version: 1.3.7
-date-released: 2025-07-31
+version: 1.3.8
+date-released: 2025-11-17
 url: "https://github.com/greenelab/lab-website-template"
 authors:
   - family-names: "Rubinetti"
@@ -11,4 +11,7 @@ authors:
   - family-names: "Greene"
     given-names: "Casey"
     orcid: "https://orcid.org/0000-0001-8713-9213"
+identifiers:
+  - type: doi
+    value: 10.5281/zenodo.17228741
 cff-version: 1.2.0

README.md

@@ -1,10 +1,9 @@
+![on-push](../../actions/workflows/on-push.yaml/badge.svg)
+![on-pull-request](../../actions/workflows/on-pull-request.yaml/badge.svg)
+![on-schedule](../../actions/workflows/on-schedule.yaml/badge.svg)
 
-  ![on-push](../../actions/workflows/on-push.yaml/badge.svg)
-  ![on-pull-request](../../actions/workflows/on-pull-request.yaml/badge.svg)
-  ![on-schedule](../../actions/workflows/on-schedule.yaml/badge.svg)
+# physycom's Website
 
-  # physycom's Website
+Visit **[physycom.github.io/website](https://physycom.github.io/website)** 🚀
 
-  Visit **[physycom.github.io/website](https://physycom.github.io/website)** 🚀
-
-  _Built with [Lab Website Template](https://greene-lab.gitbook.io/lab-website-template-docs)_
+_Built with [Lab Website Template](https://greene-lab.gitbook.io/lab-website-template-docs)_

_cite/plugins/orcid.py

@@ -84,6 +84,10 @@ def sort_id(_id):
         id_type = get_safe(_id, "external-id-type", "")
         id_value = get_safe(_id, "external-id-value", "")
 
+        # if no available ids, skip source completely
+        # if not id_type or not id_value:
+        #     continue
+
         # create source
         source = {}
 

_data/sources.yaml

@@ -1,10 +1,7 @@
-
 - id: doi:10.1088/1742-5468/ac4c40
   type: paper
   description: In this paper, we cope with the problem of the existence of universal features for pedestrian, bike and vehicular urban mobility. In particular, we propose the use of travel time as the universal energy for the mobility and we define a simple survival model that explains the travel time distribution of the different mobility types.
   tags:
     - urban mobility
     - statistics
     - multimodal
-
-

_styles/background.scss

@@ -18,4 +18,4 @@
   background-position: 50% 50%;
   opacity: 0.6;
   z-index: -1;
-}
+}